Well here's a way to prove the guy is completely wrong...
If your battery is currently in a healthy state, (i will turn the car over with reasonable urgency), plug your iPod in, and leave it connected for half a day.
If he is to be believed, then I would expect a low battery warning to come up on the display after this period...don't worry the car will start and it won't damage a thing.
Would hedge my bets that the car will be fine and dandy and no warnings will show.
Please also tell us when the car is locked and alarm has armed fully (after 30 secs) If after another 2 minutes, the Hazard warning triangle in the centre of the switch cluster is lit.
If it is, then you need to whip the +ve from the battery for enough time to make a cuppa and reconnect it to irradiate the Gremlin that's in your system!